Daniel Vogele
| Name | Daniel Vogele |
| Education/Training | M.Sc biochemistry & biophysics |
| Start of PhD Thesis and Group | 04/2021, Prof. Oliver Schilling |
| Subject of Thesis | Substrate selectivity of SARS-CoV-2 papain-like protease PLpro |
| Research Interests | Protease substrates, personalized medicine, automated sample preparation |
| Methods and Techniques | Proteomics, Mass spectrometry, Sample preparation |
| Publications |
Fröhlich K, Brombacher E, Fahrner M, Vogele D, Kook L, N. Pinter, Bornsert P, Timme-Bornsert S, Schmidt A, Bärenfaller K, Kreutz C, Schilling O. Benchmarking of analysis strategies for data-independent acquisition proteomics using a large-scale dataset comprising inter-patient heterogeneity. Nat Commun 13, 2622 (2022). https://doi.org/10.1038/s41467-022-30094-0 Schneider J, Mitschke J, Bhat M, Vogele D, Schilling O, Reinheckel T, Heß L. Cathepsin D inhibition during neuronal differentiation selectively affects individual proteins instead of overall protein turnover. Biochimie. 2024 Mar 28:S0300-9084(24)00071-3. doi: 10.1016/j.biochi.2024.03.013. Vogele D, Wöhrle S, Saller BS, Fröhlich K, Barta BA, Cosenza-Contreras M, Groß O, Schilling O. Size exclusion chromatography based proteomic and degradomic profiling of inflammasome-activated, murine bone marrow-derived dendritic cells highlights complex retention and release of cleavage products. Mol Omics. 2024 Oct 28;20(9):595-610. doi: 10.1039/d4mo00163j. PMID: 39378052; PMCID: PMC11460583. |
| Contact | daniel.vogele[at]uniklinik-freiburg.de |